'''
browser.py: part of nidmviewer package
Functions to visualize in browser
Copyright (c) 2014-2018, Vanessa Sochat
All rights reserved.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright notice, this
list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright notice,
this list of conditions and the following disclaimer in the documentation
and/or other materials provided with the distribution.
* Neither the name of the copyright holder nor the names of its
contributors may be used to endorse or promote products derived from
this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
'''
from nidmviewer.utils import make_tmp_folder
import webbrowser
import shutil
import os
try:
import SimpleHTTPServer
import SocketServer
except:
import http.server as SimpleHTTPServer
import socketserver as SocketServer
'''
View code in temporary browser!
html_snippet is the template code with images subbed
copy_list is a dictionary,
with {nidm:{brainmap1_file:temp1_file,..brainmapN_file:tempN_file}}
'''
[docs]def view(html_snippet,copy_list,port):
with make_tmp_folder() as tmp_dir:
# First copy all brain maps
for real_path,temp_path in copy_list.items():
real_path = os.path.abspath(real_path.replace("file://",""))
shutil.copy(real_path,"%s/%s" %(tmp_dir,temp_path))
# Now write template to temporary file
tmp_file = "%s/pycompare.html" %(tmp_dir)
# Change directory and start a web server
os.chdir(tmp_dir)
print(os.getcwd())
write_file(html_snippet,tmp_file)
tmp_file_base = os.path.basename(tmp_file)
if port!=None:
httpd = run_webserver(html_page="%s" %(tmp_file_base),port=port)
else:
httpd = run_webserver(html_page="%s" %(tmp_file_base))
return httpd
'''Internal view function'''
[docs]def internal_view(html_snippet,tmp_file):
url = 'file://%s' %(tmp_file)
write_file(html_snippet, tmp_file)
webbrowser.open_new_tab(url)
raw_input("Press Enter to finish...")
[docs]def write_file(html_snippet, tmp_file):
html_file = open(tmp_file,'w')
if isinstance(html_snippet, bytes):
html_snippet = html_snippet.decode('utf-8')
html_file.writelines(html_snippet)
html_file.close()
'''Web server (for Papaya Viewer in QA report'''
[docs]def run_webserver(port=8088,html_page="index.html"):
Handler = SimpleHTTPServer.SimpleHTTPRequestHandler
httpd = SocketServer.TCPServer(("", port), Handler)
print("Serving nidmviewer at port %s" %port)
webbrowser.open("http://localhost:%s/%s" %(port,html_page))
httpd.serve_forever()
return httpd
"""Get svg html from matplotlib figures (eg, glass brain images)"""
[docs]def get_svg_html(mpl_figures):
svg_images = []
with make_tmp_folder() as tmp_dir:
for fig in mpl_figures:
tmp_svg = "%s/mplfig.svg" %(tmp_dir)
fig.savefig(tmp_svg)
fig_data = open(tmp_svg,"rb").readlines()
svg_images.append(fig_data)
return svg_images